Browsing School, Graduate by Subject "p24"
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Analysis of the Molecular Mechanisms Controlling HIV-1 Capsid Assembly and Capsid's Potential as a Drug TargetThe HIV-1 core is made up of capsid proteins (CA) which house the NC-RNA complex, the viral integrase (IN), and reverse transcriptase (RT). Studies show viral infectivity is dependent on proper capsid assembly, stability, and the ability of capsid to disassemble. Despite this, the molecular mechanisms controlling HIV-1 capsid assembly and disassembly are poorly understood. Sequence analysis of CA reveals two highly conserved cysteine residues Cys198 and Cys218, which can be found in most retroviruses. A mutation of either cysteine impairs viral assembly or infectivity. It has been speculated that CA assembly or disassembly is oxidation dependent and regulated by the oxidation or reduction of the intramolecular disulfide formed between Cys198 and Cys218. We investigated the role of these conserved cysteine residues and the impact their intramolecular disulfide bond had on capsid stability and assembly. We observed that oxidized C-terminal domain (CTD) is less stable than the reduced CTD but that disulfide bond formation promotes dimerization. In the full-length CA the oxidized and double Cys-Ser mutant both assemble at the same rate, but the mutant incapable for forming a disulfide, disassembles faster. These findings suggest HIV-1 CA disassembles in a redox dependent manner. The importance of CA in HIV pathogenesis makes it an attractive therapeutic target. In addition to our evaluation of the CA on a molecular level, we also investigated the use of the CTD dimer system as a tool for screening small molecules that inhibited CA oligomerization in-vitro. We describe in full, an optimized and validated high-throughput screen based on fluorescence polarization that is able to identify small compounds that prevent CTD dimerization, and also inhibit CA oligomerization in-vitro. In-depth structural, biochemical and biophysical studies that deepen our understanding of this important viral protein are instrumental in unveiling new therapies.
Angiogenin Inhibits Human Immunodeficiency Virus type 1 (HIV-1) Replication in Peripheral Blood Mononuclear Cells by a Complex Mechanism that Includes an Intracellular ComponentAngiogenin (ANG, also known as ribonuclease 5) is a 14.1kDa polypeptide secreted by T lymphocytes and epithelial cells. Other than its well-characterized function of promoting development of vasculature, ANG also possesses anti- Human Immunodeficiency Virus-1 (HIV-1) properties. Previous findings show that ANG inhibits X4 tropic HIV-1 replication in peripheral blood mononuclear cells (PBMCs). Our studies show that ANG also inhibits R5 tropic virus, the most commonly transmitted HIV-1 strain. Inhibition was detected treating cells prior to or after infection by p24 ELISA, and is not mediated by CD4, CXCR4, or CCR5 as determined by flow cytometry assays. Furthermore, we demonstrated that ANG binds to tRNA-Lys, which serves as primer for HIV-1 reverse transcription. These results indicate that ANG inhibits HIV-1 replication by a post-entry mechanism, which might be exploited to develop new antiretroviral strategies.