Predictors of bovine Schistosoma japonicum infection in rural Sichuan, China.
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Author
Grover, ElisePaull, Sara
Kechris, Katerina
Buchwald, Andrea
James, Katherine
Liu, Yang
Carlton, Elizabeth J
Date
2022-05-26Journal
International Journal for Parasitology. Drugs and Drug ResistancePublisher
ElsevierType
Article
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In China, bovines are believed to be the most common animal source of human schistosomiasis infections, though little is known about what factors promote bovine infections. The current body of literature features inconsistent, and sometimes contradictory results, and to date, few studies have looked beyond physical characteristics to identify the broader environmental conditions that predict bovine schistosomiasis. Because schistosomiasis is a sanitation-related, water-borne disease transmitted by many animals, we hypothesised that several environmental factors - such as the lack of improved sanitation systems, or participation in agricultural production that is water-intensive - could promote schistosomiasis infection in bovines. Using data collected as part of a repeat cross-sectional study conducted in rural villages in Sichuan, China from 2007 to 2016, we used a Random Forests, machine learning approach to identify the best physical and environmental predictors of bovine Schistosoma japonicum infection. Candidate predictors included: (i) physical/biological characteristics of bovines, (ii) human sources of environmental schistosomes, (iii) socio-economic indicators, (iv) animal reservoirs, and (v) agricultural practices. The density of bovines in a village and agricultural practices such as the area of rice and dry summer crops planted, and the use of night soil as an agricultural fertilizer, were among the top predictors of bovine S. japonicum infection in all collection years. Additionally, human infection prevalence, pig ownership and bovine age were found to be strong predictors of bovine infection in at least 1 year. Our findings highlight that presumptively treating bovines in villages with high bovine density or human infection prevalence may help to interrupt transmission. Furthermore, village-level predictors were stronger predictors of bovine infection than household-level predictors, suggesting future investigations may need to apply a broad ecological lens to identify potential underlying sources of persistent transmission.Data Availibility
The datasets used in this analysis were modified to remove identifiers and personal information – including the removal of human infection data. These datasets and the complete annotated R-scripts that were used to carry out this analysis are available as supplementary files via Mendeley Data (https://doi.org/10.17632/rpw8pz3m54.1.)Data / Code Location
https://doi.org/10.17632/rpw8pz3m54.1Rights/Terms
Copyright © 2022 The Author(s). Published by Elsevier Ltd.. All rights reserved.Identifier to cite or link to this item
http://hdl.handle.net/10713/19192ae974a485f413a2113503eed53cd6c53
10.1016/j.ijpara.2022.04.002
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