Browsing UMB Open Access Articles by Author "Polf, Jerimy"
Comparison of reconstructed prompt gamma emissions using maximum likelihood estimation and origin ensemble algorithms for a Compton camera system tailored to proton range monitoring.Valencia Lozano, Ingrid; Dedes, George; Peterson, Steve; Mackin, Dennis; Zoglauer, Andreas; Beddar, Sam; Avery, Stephen; Polf, Jerimy; Parodi, Katia (Elsevier, 2022-06-21)Compton-based prompt gamma (PG) imaging is being investigated by several groups as a potential solution for in vivo range monitoring in proton therapy. The performance of this technique depends on the detector system as well as the ability of the reconstruction method to obtain good spatial resolution to establish a quantitative correlation between the PG emission and the proton beam range in the patient. To evaluate the feasibility of PG imaging for range monitoring, we quantitatively evaluated the emission distributions reconstructed by a Maximum Likelihood Expectation Maximization (MLEM) and a Stochastic Origin Ensemble (SOE) algorithm. To this end, we exploit experimental and Monte Carlo (MC) simulation data acquired with the Polaris-J Compton Camera (CC) prototype. The differences between the proton beam range (RD) defined as the 80% distal dose fall-off and the PG range (RPG), obtained by fitting the distal end of the reconstructed profile with a sigmoid function, were quantified. A comparable performance of both reconstruction algorithms was found. For both experimental and simulated irradiation scenarios, the correlation between RD and RPG was within 5 mm. These values were consistent with the ground truth distance (RD-RPGg≈ 3 mm) calculated by using the expected PG emission available from MC simulation. Furthermore, shifts of 3 mm in the proton beam range were resolved with the MLEM algorithm by calculating the relative difference between the RPG for each reconstructed profile. In non-homogeneous targets, the spatial changes in the PG emission due to the different materials could not be fully resolved from the reconstructed profiles; however, the fall-off region still resembled the ground truth emission. For this scenario, the PG correlation (RD-RPG) varied from 0.1 mm to 4 mm, which is close to the ground truth correlation (3 mm). This work provides a framework for the evaluation of the range monitoring capabilities of a CC device for PG imaging. The two investigated image reconstruction algorithms showed a comparable and consistent performance for homogeneous and heterogeneous targets.
Evaluation of computed tomography scanners for feasibility of using averaged hounsfield unit-to-stopping power ratio calibration curveChung, Heeteak; Mossahebi, Sina; Gopal, Arun; Lasio, Giovanni; Xu, Huijun; Polf, Jerimy (Allen Press, 2018-07-23)Purpose: The purpose of this study was to quantify the variability of stoichiometric calibration curves for different computed tomography (CT) scanners and determine whether an averaged Hounsfield unit (HU)-to-stopping power ratio (SPR) calibration curve can be used across multiple CT scanners. Materials and Methods: Five CT scanners were used to scan an electron density phantom to establish HU values of known material plugs. A stoichiometric calibration curve was calculated for CT scanners and for the average curve. Animal tissue surrogates were used to compare the water-equivalent thickness (WET) of the animal tissue surrogates calculated by the treatment planning system (TPS) and the WET values measured with a multilayered ionization chamber. The calibration curves were optimized to reduce the percentage of difference between measured and TPS-calculated WET values. A second set of tissue surrogates was then used to evaluate the overall range of uncertainty for the optimized CT-specific and average calibration curves. Results: Overall, the average variation in HU for all 6 calibration curves before optimization was 8.3 HU. For both the averaged and CT-specific calibrations, the root mean square error (RMSE) of the percentage of difference between TPS-calculated and measured WET values before optimization was 4%. The RMSE of the percentage of difference for the TPS-calculated and multilayered ionization chamber measured WET values after the optimization for both averaged and CT-specific calibration curves was reduced to less than 1.5%. The overall RMSE of the TPS and the measured WET percentage of difference after optimization was 2.1% for both averaged and CT-specific calibration curves. Conclusion: Averaged CT calibration curves can be used to map the HU-to-SPR in TPSs, if the variations in HU values across all scanners is relatively small. Performing tissue surrogate optimization of the HU-to-SPR calibration curve has been shown to reduce the overall uncertainty of the calibration for averaged and CT-specific calibration curves and is recommended, especially if an averaged HU-to-SPR calibration curve is used. © 2018 International Journal of Particle Therapy.
Therapeutic efficacy of variable biological effectiveness of proton therapy in u-ch2 and mug-chor1 human chordoma cell deathSingh, Prerna; Eley, John; Mahmood, Nayab; Bhandary, Binny; Dukic, Tijana; Tu, Kevin J.; Polf, Jerimy; Lamichhane, Narottam; Mahmood, Javed; Vujaskovic, Zeljko; et al. (MDPI AG, 2021-12-04)Background: Chordoma is a cancer of spinal cord, skull base, and sacral area. Currently, the standard of care to treat chordoma is resection followed by radiation therapy. Since, chordoma is present in the spinal cord and these are very sensitive structures and often complete removal by surgery is not possible. As a result, chordoma has a high chance of recurrence and developing resistance to radiation therapy. In addition, treatment of chordoma by conventional radiation therapy can also damage normal tissues surrounding chordoma. Thus, current therapeutic options to treat chordoma are insufficient and novel therapies are desperately needed to treat locally advanced and metastatic chordoma. (2) Methods: In the present investigation, human chordoma cell lines of sacral origin MUG-Chor1 and U-CH2 were cultured and irradiated with Proton Beam Radiation using the clinical superconducting cyclotron and pencil-beam (active) scanning at Middle and End of the Spread-Out Bragg Peak (SOBP). Proton radiation was given at the following doses: Mug-Chor1 at 0, 1, 2, 4, and 8 Gy and U-CH2 at 0, 4, 8, 12, and 16 Gy. These doses were selected based on a pilot study in our lab and attempted to produce approximate survival fractions in the range of 1, 0.9, 0.5, 0.1, and 0.01, respectively, chosen for linear quadratic model fitting of the dose response. (3) Results: In this study, we investigated relative biological effectiveness (RBE) of proton radiation at the end of Spread Out Bragg Peak assuming that the reference radiation is a proton radiation in the middle of the SOBP. We observed differences in the survival of both Human chordoma cell lines, U-CH2 and MUG-Chor1. The data showed that there was a significantly higher cell death at the end of the Bragg peak as compared to middle of the Bragg peak. Based on the linear quadratic (LQ) fit for cell survival we calculated the RBE between M-SOBP and E-SOBP at 95% CI level and it was observed that RBE was higher than 1 at E-SOBP and caused significantly higher cell killing. Proton field at E-SOBP Keywords:caused complexchordoma;DNA damageprotoninbeamcomparisonradiation;to M-EOBPMiddleandof the genesSpread-Outsuch asBraggDNA topoisomerase Peak (M-SOBPof1,theGTSE1,Spread-OutRAD51B wereBraggdownregulatedPeak (E-SOBP);in E-SOBPradiobiologicaltreated cells.effectiveness;Thus, we concludelinear thatenergytheretransfer;seems resistance to be substantial variation in RBE (1.3–1.7) at the E-SOBP compared with the M-SOBP. © 2021 by the authors.